3D Anatomical Data for All The oVert Thematic Collection Network


Meeting Abstract

2-2  Thursday, Jan. 4 08:15 – 08:30  3D Anatomical Data for All: The oVert Thematic Collection Network BLACKBURN, DC; BLACKBURN, David; University of Florida dblackburn@flmnh.ufl.edu http://www.blackburnlab.org

The oVert (openVertebrate) Thematic Collection Network (TCN) will generate and serve high-resolution digital three-dimensional data for internal anatomy across vertebrate diversity. At a network of digitization centers across the US, we will CT-scan >20,000 fluid-preserved specimens representing >80% of the living genera of vertebrates. This will also provide broad coverage for exploration and research on all major groups of vertebrates. We will generate contrast-enhanced scans to reveal soft tissues and organs for a majority of the living vertebrate families. This collection of digital imagery and three-dimensional volumes will be open for exploration, download, and use to address questions related to the discovery of new species, documenting patterns of anatomical diversity and growth, and testing hypotheses of function and evolution. Our network of leading US vertebrate collections will develop best practices and guidelines for high-throughput CT-scanning, including efficient workflows, preferred resolutions, and archival formats that optimize the variety of downstream applications. We will also upgrade the interface and functionality of MorphoSource, an on-line data depository for 3D data of biological specimens, improving its capacity to explore media, capture standardized metadata, ingest legacy data from previous and existing projects, supply media information to data aggregators including iDigBio, and engage educators and students. To drive the use of these digital specimens by K12 STEM educators, we will conduct teacher-driven workshops that generate freely available lesson plans focused on specific science standards that are based on digital and printed 3D models of specimens in US museum collections.

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